Thermodynamics Research Center / ThermoML | Journal of Chemical Thermodynamics

Solvation behavior of some nucleic acid bases and nucleosides in water and in aqueous guanidine hydrochloride solutions: Viscometric, calorimetric and spectroscopic approach

Banipal, T. S.[Tarlok S.], Kaur, N.[Navalpreet], Banipal, P. K.[Parampaul K.]
J. Chem. Thermodyn. 2016, 95, 149-158
ABSTRACT
Viscosity, g and enthalpy of dilution, q of studied nucleic acid bases (uracil, cytosine, thymine) and nucleosides (uridine, cytidine and thymidine) in water and in aqueous solutions of (0.10, 0.25, 0.50, 0.75 and 1.00) mol kg 1 guanidine hydrochloride (GnHCl) have been determined over a temperature range (288.15-318.15) K at (101.3 +- 0.5) kPa. These data have been used to calculate viscosity B-coefficients and standard molar enthalpy of dilution, DdilHo which have further been used to evaluate corresponding transfer parameters DtrB and DtrDdilHo, respectively. Positive DtrB values and negative DtrDdilHo values indicate the predominance of hydrophilic ionic interactions in these systems. Temperature dependence of B-coefficient and DdilHo has also been discussed. Spectroscopic studies have been carried out to further investigate the structural changes and the interactions involved in the mixed aqueous solutions.
Compounds
# Formula Name
1 C4H4N2O2 2,4(1H,3H)-pyrimidinedione
2 C4H5N3O 4-amino-2-hydroxypyrimidine
3 C5H6N2O2 thymine
4 C9H12N2O6 uridine
5 C9H13N3O5 cytidine
6 C10H14N2O5 thymidine
7 CH6ClN3 guanidine hydrochloride
8 H2O water
Datasets
The table above is generated from the ThermoML associated json file (link above). POMD and RXND refer to PureOrMixture and Reaction Datasets. The compound numbers are included in properties, variables, and phases, if specificied; the numbers refer to the table of compounds on the left.
Type Compound-# Property Variable Constraint Phase Method #Points
  • POMD
  • 8
  • Viscosity, Pa*s ; Liquid
  • Temperature, K; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Capillary tube (Ostwald; Ubbelohde) method
  • 4
  • POMD
  • 7
  • 1
  • 8
  • Viscosity, Pa*s ; Liquid
  • Temperature, K; Liquid
  • Solvent: Molality, mol/kg - 7; Liquid
  • Molality, mol/kg - 1; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Capillary tube (Ostwald; Ubbelohde) method
  • 168
  • POMD
  • 7
  • 2
  • 8
  • Viscosity, Pa*s ; Liquid
  • Temperature, K; Liquid
  • Solvent: Molality, mol/kg - 7; Liquid
  • Molality, mol/kg - 2; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Capillary tube (Ostwald; Ubbelohde) method
  • 168
  • POMD
  • 7
  • 3
  • 8
  • Viscosity, Pa*s ; Liquid
  • Temperature, K; Liquid
  • Solvent: Molality, mol/kg - 7; Liquid
  • Molality, mol/kg - 3; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Capillary tube (Ostwald; Ubbelohde) method
  • 168
  • POMD
  • 7
  • 4
  • 8
  • Viscosity, Pa*s ; Liquid
  • Temperature, K; Liquid
  • Solvent: Molality, mol/kg - 7; Liquid
  • Molality, mol/kg - 4; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Capillary tube (Ostwald; Ubbelohde) method
  • 168
  • POMD
  • 7
  • 5
  • 8
  • Viscosity, Pa*s ; Liquid
  • Temperature, K; Liquid
  • Solvent: Molality, mol/kg - 7; Liquid
  • Molality, mol/kg - 5; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Capillary tube (Ostwald; Ubbelohde) method
  • 168
  • POMD
  • 7
  • 6
  • 8
  • Viscosity, Pa*s ; Liquid
  • Temperature, K; Liquid
  • Solvent: Molality, mol/kg - 7; Liquid
  • Molality, mol/kg - 6; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Capillary tube (Ostwald; Ubbelohde) method
  • 168
  • POMD
  • 1
  • 8
  • Molar enthalpy of dilution, kJ/mol ; Liquid
  • Temperature, K; Liquid
  • Initial molality of solute, mol/kg; Liquid
  • Pressure, kPa; Liquid
  • Final molality of solute, mol/kg; Liquid
  • Liquid
  • Calvet calorimetry
  • 4
  • POMD
  • 1
  • 8
  • Viscosity, Pa*s ; Liquid
  • Temperature, K; Liquid
  • Molality, mol/kg - 1; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Capillary tube (Ostwald; Ubbelohde) method
  • 24
  • POMD
  • 7
  • 8
  • Viscosity, Pa*s ; Liquid
  • Temperature, K; Liquid
  • Molality, mol/kg - 7; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Capillary tube (Ostwald; Ubbelohde) method
  • 20
  • POMD
  • 2
  • 8
  • Molar enthalpy of dilution, kJ/mol ; Liquid
  • Temperature, K; Liquid
  • Initial molality of solute, mol/kg; Liquid
  • Pressure, kPa; Liquid
  • Final molality of solute, mol/kg; Liquid
  • Liquid
  • Calvet calorimetry
  • 4
  • POMD
  • 2
  • 8
  • Viscosity, Pa*s ; Liquid
  • Temperature, K; Liquid
  • Molality, mol/kg - 2; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Capillary tube (Ostwald; Ubbelohde) method
  • 24
  • POMD
  • 3
  • 8
  • Molar enthalpy of dilution, kJ/mol ; Liquid
  • Temperature, K; Liquid
  • Initial molality of solute, mol/kg; Liquid
  • Pressure, kPa; Liquid
  • Final molality of solute, mol/kg; Liquid
  • Liquid
  • Calvet calorimetry
  • 4
  • POMD
  • 3
  • 8
  • Viscosity, Pa*s ; Liquid
  • Temperature, K; Liquid
  • Molality, mol/kg - 3; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Capillary tube (Ostwald; Ubbelohde) method
  • 24
  • POMD
  • 4
  • 8
  • Molar enthalpy of dilution, kJ/mol ; Liquid
  • Temperature, K; Liquid
  • Initial molality of solute, mol/kg; Liquid
  • Pressure, kPa; Liquid
  • Final molality of solute, mol/kg; Liquid
  • Liquid
  • Calvet calorimetry
  • 4
  • POMD
  • 4
  • 8
  • Viscosity, Pa*s ; Liquid
  • Temperature, K; Liquid
  • Molality, mol/kg - 4; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Capillary tube (Ostwald; Ubbelohde) method
  • 24
  • POMD
  • 5
  • 8
  • Molar enthalpy of dilution, kJ/mol ; Liquid
  • Temperature, K; Liquid
  • Initial molality of solute, mol/kg; Liquid
  • Pressure, kPa; Liquid
  • Final molality of solute, mol/kg; Liquid
  • Liquid
  • Calvet calorimetry
  • 4
  • POMD
  • 5
  • 8
  • Viscosity, Pa*s ; Liquid
  • Temperature, K; Liquid
  • Molality, mol/kg - 5; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Capillary tube (Ostwald; Ubbelohde) method
  • 24
  • POMD
  • 6
  • 8
  • Molar enthalpy of dilution, kJ/mol ; Liquid
  • Temperature, K; Liquid
  • Initial molality of solute, mol/kg; Liquid
  • Pressure, kPa; Liquid
  • Final molality of solute, mol/kg; Liquid
  • Liquid
  • Calvet calorimetry
  • 4
  • POMD
  • 6
  • 8
  • Viscosity, Pa*s ; Liquid
  • Temperature, K; Liquid
  • Molality, mol/kg - 6; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Capillary tube (Ostwald; Ubbelohde) method
  • 24