Thermodynamics Research Center / ThermoML | Journal of Chemical Thermodynamics

Volumetric studies on nucleic acid bases and nucleosides in aqueous guanidine hydrochloride solutions at T = (288.15 to 318.15) K and at atmospheric pressure

Banipal, T. S.[Tarlok S.], Kaur, N.[Navalpreet], Banipal, P. K.[Parampaul K.]
J. Chem. Thermodyn. 2015, 82, 12-24
ABSTRACT
Apparent molar volumes (V2,/) have been determined from density measurements for some nucleic acid bases (uracil, cytosine, thymine), and nucleosides (uridine, cytidine and thymidine) in water and in aqueous solutions of (0.10, 0.25, 0.50, 0.75 and 1.00) mol kg 1 guanidine hydrochloride (co-solute) over the temperature range (288.15 to 318.15) K, at atmospheric pressure using vibrating-tube digital densimeter. These data have further been used to calculate apparent molar volumes Vo 2;/ at infinite dilution and the corresponding apparent molar volumes of transfer DtrVo 2;/ at infinite dilution from water to aqueous solutions of guanidine hydrochloride (GnHCl). Apparent molar expansibilities (Eo 2;/), second-order derivative and volumetric interaction coefficients have also been calculated. Co-sphere overlap model has been used to rationalize the data in terms of molecular interactions (hydrophilic, hydrophobic and ionic interactions). The present data have been compared and discussed for the systems studied with those reported in the presence of other co-solutes. The contributions of CH2 group to Vo 2;/ have also been calculated at different temperatures and concentrations of GnHCl.
Compounds
# Formula Name
1 C4H4N2O2 2,4(1H,3H)-pyrimidinedione
2 C4H5N3O 4-amino-2-hydroxypyrimidine
3 C5H6N2O2 thymine
4 C9H12N2O6 uridine
5 C9H13N3O5 cytidine
6 C10H14N2O5 thymidine
7 CH6ClN3 guanidine hydrochloride
8 H2O water
Datasets
The table above is generated from the ThermoML associated json file (link above). POMD and RXND refer to PureOrMixture and Reaction Datasets. The compound numbers are included in properties, variables, and phases, if specificied; the numbers refer to the table of compounds on the left.
Type Compound-# Property Variable Constraint Phase Method #Points
  • POMD
  • 8
  • Mass density, kg/m3 ; Liquid
  • Temperature, K; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Vibrating tube method
  • 4
  • POMD
  • 7
  • 1
  • 8
  • Mass density, kg/m3 ; Liquid
  • Temperature, K; Liquid
  • Solvent: Molality, mol/kg - 7; Liquid
  • Molality, mol/kg - 1; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Vibrating tube method
  • 174
  • POMD
  • 7
  • 2
  • 8
  • Mass density, kg/m3 ; Liquid
  • Temperature, K; Liquid
  • Solvent: Molality, mol/kg - 7; Liquid
  • Molality, mol/kg - 2; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Vibrating tube method
  • 174
  • POMD
  • 7
  • 3
  • 8
  • Mass density, kg/m3 ; Liquid
  • Temperature, K; Liquid
  • Solvent: Molality, mol/kg - 7; Liquid
  • Molality, mol/kg - 3; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Vibrating tube method
  • 168
  • POMD
  • 7
  • 4
  • 8
  • Mass density, kg/m3 ; Liquid
  • Temperature, K; Liquid
  • Solvent: Molality, mol/kg - 7; Liquid
  • Molality, mol/kg - 4; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Vibrating tube method
  • 175
  • POMD
  • 7
  • 5
  • 8
  • Mass density, kg/m3 ; Liquid
  • Temperature, K; Liquid
  • Solvent: Molality, mol/kg - 7; Liquid
  • Molality, mol/kg - 5; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Vibrating tube method
  • 168
  • POMD
  • 7
  • 6
  • 8
  • Mass density, kg/m3 ; Liquid
  • Temperature, K; Liquid
  • Solvent: Molality, mol/kg - 7; Liquid
  • Molality, mol/kg - 6; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Vibrating tube method
  • 168
  • POMD
  • 7
  • 8
  • Mass density, kg/m3 ; Liquid
  • Temperature, K; Liquid
  • Molality, mol/kg - 7; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Vibrating tube method
  • 20
  • POMD
  • 1
  • 8
  • Mass density, kg/m3 ; Liquid
  • Temperature, K; Liquid
  • Molality, mol/kg - 1; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Vibrating tube method
  • 30
  • POMD
  • 2
  • 8
  • Mass density, kg/m3 ; Liquid
  • Temperature, K; Liquid
  • Molality, mol/kg - 2; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Vibrating tube method
  • 30
  • POMD
  • 3
  • 8
  • Mass density, kg/m3 ; Liquid
  • Temperature, K; Liquid
  • Molality, mol/kg - 3; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Vibrating tube method
  • 24
  • POMD
  • 4
  • 8
  • Mass density, kg/m3 ; Liquid
  • Temperature, K; Liquid
  • Molality, mol/kg - 4; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Vibrating tube method
  • 31
  • POMD
  • 5
  • 8
  • Mass density, kg/m3 ; Liquid
  • Temperature, K; Liquid
  • Molality, mol/kg - 5; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Vibrating tube method
  • 24
  • POMD
  • 6
  • 8
  • Mass density, kg/m3 ; Liquid
  • Temperature, K; Liquid
  • Molality, mol/kg - 6; Liquid
  • Pressure, kPa; Liquid
  • Liquid
  • Vibrating tube method
  • 24